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E-GEOD-47045 GSE47045 transcription profiling by array Mus musculus

Development pathway for skin resident memory CD103+CD8+ T cells

·发布 2013年10月1日 ·更新 2013年10月7日
24
样本数
24
实验数
1
芯片平台
实验描述

Tissue resident memory T cells (TRM) provide superior protection against infection localised to extra-lymphoid compartments in the body. Here we show that CD103+CD8+ TRM cells develop in skin from killer cell lectin-like receptor (KLR)G1-negative precursors that selectively infiltrate the epithelial layer. In the skin, a combination of chemokine-guided epithelial entry, local interleukin (IL)-15 and transforming growth factor (TGF)-β signalling is required for formation and survival of these long-lived memory cells. Importantly, TRM differentiation results in the gradual acquisition of a unique transcriptional profile that differs from that expressed by memory cells in the circulation and other types of skin-resident intra-epithelial T cells, such as the dendritic epidermal T cells (DETC). We provide a comprehensive molecular and developmental framework for the local differentiation of a distinct type of peripheral memory T cell that contributes to an important first-line of immune defence in barrier tissues such as skin and mucosa. 24 samples were analyzed: 3 replicates of memory gB-T CD8+. CD103+ T cells isolated from the skin of C57/BL6 mice on day 30 p.i. with HSV KOS. 3 replicates of memory P14 CD8+ T cells isolated from gut of mice on day 60 p.i. with LCMV Armstrong. 3 replicates of memory gB-T CD8+ T cells from the lung of mice on day 30 p.i. with influenza WSN. 3 replicates of memory CD62L high CD8+ T cells from the spleen of mice on day 30 p.i. with HSV KOS. 3 replicates of memory CD62L low CD8+ T cells from the spleen of mice of day 30 p.i. with HSV KOS. 3 replicates of γδ-DETC isolated from the skin of C57/BL6 mice on day 30 p.i. with HSV KOS. 3 replicates of αβ-DETC from naive TCRδ-/- mice; and 3 replicates of naive gB-T CD8+ T cells from the spleen of naive gB-T transgenic mice.

芯片平台
A-AFFY-130
Affymetrix GeneChip Mouse Gene 1.0 ST Array [MoGene-1_0-st-v1](24 例)
样本属性
cell type
memory CD62L high CD8+ T cells, memory CD62L low CD8+ T cells, memory gB-T CD8+ T cells, memory gB-T CD8+. CD103+ T cells, memory P14 CD8+ T cells, naive gB-T CD8+ T cells, αβ-dendritic epidermal T cells (DETC), γδ-dendritic epidermal T cells (DETC)
infection
Flu WSN, 30 days p.i., HSV, 30 days p.i., LCMV, 60 days p.i., naïve, na�ve
organism
Mus musculus
organism part
gut, lung, skin, spleen
strain or line
C57/BL6
实验信息
登记号
E-GEOD-47045
GEO 编号
GSE47045
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2013年10月1日
更新日期
2013年10月7日
提交者
W R Heath、 M L Hafon、 T Gebhardt、 F R Carbone、 T Stefanovic、 Joel Zhi-Iong Ma、 M Inouye、 P Lauzurica、 L K Mackay、 A T Stock、 N Collins、 A Rahimpour、 J Z Ma、 J Vega-Ramos、 D C Tscharke
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分析服务

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