主页实验库实验详情

E-GEOD-45715 GSE45715 ChIP-seq, transcription profiling by ... Homo sapiens

Genome-wide analysis of BRCA1 and PALB2

·发布 2013年9月30日 ·更新 2014年6月3日

样本数

实验数

芯片平台

实验描述

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

芯片平台

A-GEOD-10558

Illumina HumanHT-12 V4.0 expression beadchip（42 例）

样本属性

cell line

MCF-7, MCF10A

cell subtype

None, BRCA1 depleted cells, control cells, p65/RelA depleted cells, PALB2 depleted cells

cell type

breast adenocarcinoma cells, breast epithelial cells

chip-seq antibody

None, anti-BRCA1 rabbit polyclonal I-20, anti-P-ser2 RNAPII rabbit polyclonal, anti-PALB2 rabbit polyclonal

chip-seq antibody cat. #

None, A300-654A, A301-246A, sc646

chip-seq antibody vendor

None, Bethyl, Santa Cruz

genotype

None, BRCA1 knockdown (shRNAs), PALB2 knockdown (shRNAs)

infected with

None, BRCA1 shRNAs, non-targeting (SCR) shRNAs, p65/RelA shRNAs, PALB2 shRNAs

molecule subtype

None, immunoprecipitated DNA, polyA RNA, total RNA - ribosome depleted

organism

Homo sapiens

sample type

None, ChIP-seq, RNA-seq, RNA-seq strand specific

stimulated with

None, 10microM Retinoic Acid (RA) for 24 h, 10ng/ml of TNF-alpha for 1h, none (unstimulated)

实验信息

登记号

E-GEOD-45715

GEO 编号

GSE45715

实验类型

ChIP-seq, transcription profiling by array, RNA-seq of coding RNA

物种

Homo sapiens

发布日期

2013年9月30日

更新日期

2014年6月3日

提交者

Alessandro Gardini

外部链接

ArrayExpress 原始页 NCBI GEO：GSE45715

分析服务

Genome-wide analysis of BRCA1 and PALB2

联系地址

微信公众号