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E-GEOD-33261 GSE33261 transcription profiling by array Rhodobacter sphaeroides 2.4.1

Role of a short LOV protein in blue light- and singlet oxygen-dependent gene regulation in Rhodobacter sphaeroides

·发布 Oct. 25, 2011 ·更新 May 3, 2014
12
样本数
6
实验数
2
芯片平台
实验描述

The facultatively photosynthetic bacterium Rhodobacter sphaeroides harbors an unusual LOV (light, oxygen, voltage) domain protein, RsLOV. While showing a characteristic photocycle, the protein misses a C - terminal output domain, similar to PpSB2 in Pseudomonas putida. Oxygen tension and light quantity are the two main responsible factors controlling the expression of photosynthesis genes in Rhodobacter sphaeroides. Two photoreceptor proteins are known to be involved in this regulation: the intensively studied AppA protein and the more recently identified cryptochrome-like protein CryB. Here we show by transcriptome and physiological studies that RsLOV is also involved in the regulation of photosynthetic gene expression. Our data further hint to a connection between RsLOV and the carbon hydrate metabolism, chemotaxis, as well as to the cellular response to photooxidative stress. RsLOV does not only affect blue light dependent gene expression but also redox-dependent regulation. This SuperSeries is composed of the following subset Series: GSE33194: R. sphaeroides Δlov vs. R. sphaeroides 2.4.1 (microarobic conditions) GSE33259: R. sphaeroides Δlov vs. R. sphaeroides 2.4.1 (blue light, semiaerobic conditions) GSE33260: R. sphaeroides Δlov vs. R. sphaeroides 2.4.1 (singlet oxygen stress, aerobic conditions)

芯片平台
A-GEOD-14782
Agilent-024600/Klug lab Rhodobacter sphaeroides 2.4.1 - 15k array v1 (122 sRNAs)(2 例)
A-GEOD-14796
Agilent-027061/Klug lab Rhodobacter sphaeroides - 15k array v2 (144 sRNA)(4 例)
样本属性
genotype/variation
wild type, Δlov
growth protocol
blue light, semiaerobic conditions, microaerobic conditions, singlet oxygen stress, aerobic conditions
Organism
Rhodobacter sphaeroides 2.4.1
实验信息
登记号
E-GEOD-33261
GEO 编号
GSE33261
实验类型
transcription profiling by array
物种
Rhodobacter sphaeroides 2.4.1
发布日期
Oct. 25, 2011
更新日期
May 3, 2014
提交者
Sebastian Harald Michael Metz
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