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E-GEOD-21321 GSE21321 transcription profiling by array Homo sapiens

Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus

·发布 April 24, 2010 ·更新 June 10, 2011
50
样本数
50
实验数
2
芯片平台
实验描述

In this study, we compared the expression profiles of miRNAs in blood samples from Impaired Fasting Glucose (IFG) and T2D male patients. Healthy adult males with no past history of T2D (n=158) and with desirable cholesterol and blood pressure profiles were enrolled in this study. They were then classified according to fasting glucose levels to have T2D, IFG or as healthy controls (CTL), for comparison of miRNA expression profiles. Employing miRNA microarray, we identified ‘signature miRNAs’ in peripheral blood samples that distinguished IFG and T2D. Eight selected miRNAs were further validated using stem-loop real-time RT-PCR. miR-144 expression was found to be dysregulated in Type 2 Diabetes, wherein its expression was significantly higher than in healthy controls. Insulin receptor substrate 1 (IRS1) has been predicted to be a potential target of miR-144. Consistent with this observation, IRS1 mRNA and protein levels, verified by quantitative real-time PCR and western blotting respectively, were found to be down-regulated. Dysregulation in expression of microRNAs (miRNAs) in various tissues has been linked to a wide spectrum of diseases, including Type 2 Diabetes mellitus (T2D). In this study, we compared the expression profiles of miRNAs in blood samples from Impaired Fasting Glucose (IFG) and T2D male patients. Healthy adult males with no past history of T2D (n=158) and with desirable cholesterol and blood pressure profiles were enrolled in this study. They were then classified according to fasting glucose levels to have T2D, IFG or as healthy controls (CTL), for comparison of miRNA expression profiles. Employing miRNA microarray, we identified ‘signature miRNAs’ in peripheral blood samples that distinguished IFG and T2D. Eight selected miRNAs were further validated using stem-loop real-time RT-PCR. miR-144 expression was found to be dysregulated in Type 2 Diabetes, wherein its expression was significantly higher than in healthy controls. Insulin receptor substrate 1 (IRS1) has been predicted to be a potential target of miR-144. Consistent with this observation, IRS1 mRNA and protein levels, verified by quantitative real-time PCR and western blotting respectively, were found to be down-regulated. Using luciferase assay, we further demonstrated that miR-144 directly targets IRS1 and showed its effects on protein expression via immunocytochemistry. From this cross-sectional study in humans, we have identified signature miRNAs which could explain the pathogenesis of T2D. Whether miRNAs like miR-144 could be potential therapeutic targets for management of T2D will need to be explored by further mechanistic and functional studies. Total RNA (plus miRNAs) was isolated using a modification of the RiboPure™-Blood kit from Ambion (Austin,TX) according to the manufacturer’s protocol. The concentration of total RNA and integrity were determined by using Nano-Drop ND-1000 Spectrophotometry (NanoDrop Tech, Rockland, Del) and gel electrophoresis respectively.

芯片平台
A-MEXP-1172
Illumina HumanRef-8 v3.0 Expression BeadChip(24 例)
A-GEOD-10322
miRCURY LNA microRNA Array, v.11.0 - hsa, mmu & rno [probe-level](26 例)
样本属性
gender
male
Organism
Homo sapiens
patient type
control 1, control 10, control 2, control 3, control 4, control 5, control 6, control 7, control 8, control 9, impaired fasting glucose 1, impaired fasting glucose 2, impaired fasting glucose 3, impaired fasting glucose 4, impaired fasting glucose 5, impaired fasting glucose 6, impaired fasting glucose 7, type 2 diabetes 1, type 2 diabetes 2, type 2 diabetes 3, type 2 diabetes 4, type 2 diabetes 5, type 2 diabetes 6, type 2 diabetes 7, type 2 diabetes 8, type 2 diabetes 9
实验信息
登记号
E-GEOD-21321
GEO 编号
GSE21321
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
April 24, 2010
更新日期
June 10, 2011
提交者
DwiSetyowati Karolina、 Tavintharan Subramaniam、 Kandiah Jeyaseelan、 Arunmozhiarasi Armugam
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