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E-GEOD-11546 GSE11546 unknown experiment type Homo sapiens

Age-related changes in the expression of schizophrenia susceptibility genes in the human prefrontal cortex

·发布 May 23, 2008 ·更新 March 27, 2012
72
样本数
72
实验数
1
芯片平台
1
相关文献
实验描述

The molecular basis of complex neuropsychiatric disorders most likely involves many genes. In recent years, specific genetic variations influencing risk for schizophrenia and other neuropsychiatric disorders have been reported. We have used custom DNA microarrays and qPCR to investigate the expression of putative schizophrenia susceptibility genes and related genes of interest in the normal human brain. Expression of 31 genes was measured in Brodmann's area 10 (BA10) in the prefrontal cortex of 72 postmortem brain samples spanning half a century of human aging (18-67 years), each without history of neuropsychiatric illness, neurological disease, or drug abuse. Examination of expression across age allowed the identification of genes whose expression patterns correlate with age, as well as genes that share common expression patterns and that possibly participate in common cellular mechanisms related to the emergence of schizophrenia in early adult life. The expression of GRM3 and RGS4 decreased across the entire age range surveyed, while that of PRODH and DARPP-32 was shown to increase with age. NRG1, ERBB3, and NGFR show expression changes during the years of greatest risk for the development of schizophrenia. Expression of FEZ1, GAD1, and RGS4 showed especially high correlation with one another, in addition to the strongest mean levels of absolute correlation with all other genes studied here. Keywords: postmortem human brain collection Supplementary files: Gene expression measures in Matrix1379Normalized.txt include all data from the 1379 probes on the arrays, and are NOT adjusted for PMI, brain pH, and RIN, and are NOT averaged over multiple probes within genes. Raw data are located in Raw_1241842_gene_probe_profile.txt. We have used custom DNA microarrays to investigate gene expression in the normal human brain. Expression was measured in Brodmann's area 10 (BA10) in the prefrontal cortex of 72 postmortem brain samples spanning half a century of human aging (18-67 years), each without history of neuropsychiatric illness, neurological disease, or drug abuse.

参考文献
Age-related changes in the expression of schizophrenia susceptibility genes in the human prefrontal cortex.
Colantuoni C, Hyde TM, Mitkus S, Joseph A, Sartorius L, Aguirre C, Creswell J, Johnson E, Deep-Soboslay A, Herman MM, Lipska BK, Weinberger DR, Kleinman JE
PMID: 18470533
芯片平台
A-GEOD-6893
NIMH, CBDB Illumina Sentrix Array Matrix _1.4k(72 例)
样本属性
age
18yr, 19yr, 20yr, 21yr, 24yr, 26yr, 27yr, 28yr, 29yr, 31yr, 34yr, 36yr, 37yr, 38yr, 39yr, 43yr, 44yr, 45yr, 46yr, 47yr, 48yr, 49yr, 50yr, 51yr, 52yr, 53yr, 55yr, 56yr, 57yr, 58yr, 59yr, 60yr, 61yr, 62yr, 63yr, 64yr, 67yr
Brain pH
6.07, 6.08, 6.09, 6.1, 6.17, 6.27, 6.29, 6.32, 6.34, 6.37, 6.38, 6.4, 6.42, 6.43, 6.45, 6.46, 6.49, 6.5, 6.52, 6.53, 6.54, 6.55, 6.57, 6.58, 6.59, 6.6, 6.62, 6.63, 6.65, 6.67, 6.68, 6.69, 6.71, 6.76, 6.77, 6.78, 6.79, 6.83, 6.85, 6.87, 6.88, 6.91, 6.92, 6.93, 6.95, 7.01, 7.1, null
Ethnicity
African–American, Asian, Caucasian, Hispanic
Gender
female, male
Organism
Homo sapiens
Postmortem interval (h)
10, 11.5, 12.5, 13, 13.5, 14.5, 15, 18, 18.5, 19, 19.5, 20.5, 21, 21.5, 22, 22.5, 23, 24, 25.5, 26, 28, 28.5, 29, 29.5, 30.5, 32, 32.5, 33, 33.5, 34, 36, 36.5, 37, 38.5, 40, 42, 43, 43.5, 49, 50.5, 51.5, 52, 52.5, 53, 54.5, 56, 57, 58, 63, 7.5, 9.5
RNA integrity number (RIN)
5.4, 5.8, 5.9, 6, 6.1, 6.2, 6.3, 6.5, 6.6, 6.7, 6.9, 7, 7.1, 7.2, 7.3, 7.4, 7.5, 7.6, 7.7, 7.8, 7.9, 8, 8.1, 8.2, 8.3, 8.4, 8.7, 8.9, 9.2, 9.4, null
实验信息
登记号
E-GEOD-11546
GEO 编号
GSE11546
实验类型
unknown experiment type
物种
Homo sapiens
发布日期
May 23, 2008
更新日期
March 27, 2012
提交者
Carlo Colantuoni、 Thomas M Hyde、 Andrew Joseph、 Elizabeth Johnson、 Johanna Creswell、 Daniel R Weinberger、 Joel E Kleinman、 Claudia Aguirre、 Leah Sartorius、 Mary M Herman、 Shruti Mitkus、 Amy Deep-Soboslay、 Barbara K Lipska
分析服务
分析服务

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