TNNT1 (troponin T1, slow skeletal type)

symbol:
TNNT1
locus group:
protein-coding gene
location:
19q13.42
gene_family:
alias symbol:
ANM|STNT|TNT|TNTS|FLJ98147|MGC104241|NEM5
alias name:
slow skeletal muscle troponin T|tr…
entrez id:
7138
ensembl gene id:
ENSG00000105048
ucsc gene id:
uc002qjb.5
refseq accession:
NM_003283
hgnc_id:
HGNC:11948
approved reserved:
1990-09-10
19q13.42
基因染色体位置图

TNNT1(Troponin T1,慢骨骼肌肌钙蛋白T1)属于肌钙蛋白T(TnT)基因家族,该家族包括TNNT1、TNNT2(心脏型)和TNNT3(快骨骼肌型),共同编码肌钙蛋白复合体的T亚基,参与肌肉收缩的钙离子依赖性调节。TNNT1主要在慢收缩骨骼肌纤维中表达,其编码的蛋白与肌钙蛋白I(TnI)和肌钙蛋白C(TnC)结合形成复合体,通过结合原肌球蛋白调节肌动蛋白-肌球蛋白相互作用,从而控制肌肉收缩。TNNT1突变可导致常染色体隐性遗传病“先天性纤维型比例失调(CFTD)”,表现为肌无力、运动发育迟缓及慢肌纤维占主导的病理特征,如Nemaline肌病(杆状体肌病)。突变可能破坏肌钙蛋白复合体稳定性或钙敏感性,影响收缩功能。过表达TNNT1可能干扰其他肌钙蛋白亚型的平衡,导致肌肉功能异常;而表达降低则直接损害慢肌纤维收缩效率。该基因家族共性为:均含多个可变剪接外显子,产生组织特异性异构体,通过调控钙信号通路影响横纹肌收缩特性。目前“Troponin T1”中文译名统一,无术语争议。

This gene encodes a protein that is a subunit of troponin, which is a regulatory complex located on the thin filament of the sarcomere. This complex regulates striated muscle contraction in response to fluctuations in intracellular calcium concentration. This complex is composed of three subunits: troponin C, which binds calcium, troponin T, which binds tropomyosin, and troponin I, which is an inhibitory subunit. This protein is the slow skeletal troponin T subunit. Mutations in this gene cause nemaline myopathy type 5, also known as Amish nemaline myopathy, a neuromuscular disorder characterized by muscle weakness and rod-shaped, or nemaline, inclusions in skeletal muscle fibers which affects infants, resulting in death due to respiratory insufficiency, usually in the second year. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

这个基因编码的蛋白质是肌钙蛋白亚基,它是位于肌节的细丝的调节复杂。这种复杂的调节横纹肌收缩响应于细胞内钙离子浓度的波动。该复合体由三个亚基:肌钙蛋白C,其结合钙,肌钙蛋白T,其结合原肌球蛋白,和肌钙蛋白I,这是一种抑制性亚基。这种蛋白质是缓慢的骨骼肌钙蛋白T亚基。在该基因导致杆状体肌病5型突变,也称为阿米什杆状体肌病,神经肌肉疾病,其特征是肌肉无力和棒状或杆状体,在骨骼肌纤维会影响婴儿,导致死亡由于呼吸机能不全的夹杂物,一般在第二年。已发现该基因编码不同亚型的多个抄本变形。 [由RefSeq的,2008年7月提供]

TNNT1基因的碱基序列:[NCBI]
Loading Gene Browser...
TNNT1基因的碱基突变:           仅显示部分snp
rs538851968       rs558756833       rs566743860       rs890868       rs891185       rs891186       rs2434453       rs2434454       rs2560942       rs2560946       rs2562509       rs2562510       rs2742058       rs2742059       rs2742060       rs2742061       rs2742062      

TNNT1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AGGAGCAGGAATATGAGGAG
58
GGTGGATGTCATCGAAGTC
58
GAGAAGTTCGACCTGATGG
58
GAGACGCAGTAACTTCTGG
58
CTGTGTTTCTGTCCACTCAG
59
GGTGGATGTCATCGAAGTC
58
TCACAGCATCTCAGACACAG
60
ATATTCCTGCTCCTCGGTG
59
GAAGGAAGAGGAAGAGGCC
60
TTCTGTTCTGCCTTGACCA
59
AGGAGCAGGAATATGAGGAG
58
GGTGGATGTCATCGAAGTC
58
CAGAAATATGAGATCAACGTGC
58
AGCTGAGATCACTCCACTG
58
GAAGGAAGAGGAAGAGGCC
60
TTCTGTTCTGCCTTGACCA
59
GGAGGAGAAGATGAGGAAGG
59
CTTCTGTTCTGCCTTGACC
58
GAAGGAAGAGGAAGAGGCC
60
TTCTGTTCTGCCTTGACCA
59
      尚未收录相关数据

TNNT1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

TNNT1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005861
K7EKM3 (UniProtKB)
IEA
GO:0006937
K7EKM3 (UniProtKB)
IEA
GO:0005861
K7ELB0 (UniProtKB)
IEA
GO:0006937
K7ELB0 (UniProtKB)
IEA
GO:0005861
K7EQL4 (UniProtKB)
IEA
GO:0006937
K7EQL4 (UniProtKB)
IEA
GO:0005861
M0QX01 (UniProtKB)
IEA
GO:0006937
M0QX01 (UniProtKB)
IEA
GO:0005861
M0QY38 (UniProtKB)
IEA
GO:0006937
M0QY38 (UniProtKB)
IEA
GO:0005861
M0QZU8 (UniProtKB)
IEA
GO:0006937
M0QZU8 (UniProtKB)
IEA
GO:0005861
M0QZY5 (UniProtKB)
IEA
GO:0006937
M0QZY5 (UniProtKB)
IEA
GO:0003009
P13805 (UniProtKB)
IMP
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005515
P13805 (UniProtKB)
IPI
GO:0005523
P13805 (UniProtKB)
IMP
GO:0005829
P13805 (UniProtKB)
TAS
GO:0005829
P13805 (UniProtKB)
TAS
GO:0005829
P13805 (UniProtKB)
TAS
GO:0005829
P13805 (UniProtKB)
TAS
GO:0005861
P13805 (UniProtKB)
IMP
GO:0005861
P13805 (UniProtKB)
IDA
GO:0014883
P13805 (UniProtKB)
IEA
GO:0030049
P13805 (UniProtKB)
TAS
GO:0031014
P13805 (UniProtKB)
IEA
GO:0031444
P13805 (UniProtKB)
IEA
GO:0045932
P13805 (UniProtKB)
IDA
GO:0005861
Q3B759 (UniProtKB)
IEA
GO:0006937
Q3B759 (UniProtKB)
IEA

可能调控 TNNT1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
NEMALINE MYOPATHY 5 0.320542884 2 1 BeFree_CLINVAR_CTD_human_MGD
Myopathies, Nemaline 0.00408156 5 0 BeFree_LHGDN
Myotonic Dystrophy 0.000542884 2 0 BeFree
Congenital Myotonic Dystrophy 0.000542884 2 0 BeFree
Ewings sarcoma 0.000271442 1 0 BeFree
Ovarian Failure, Premature 0.000271442 1 0 BeFree
Neoplasm, Residual 0.000271442 1 0 BeFree
Rhabdomyosarcoma 0.000271442 1 0 BeFree
Turner Syndrome 0.000271442 1 0 BeFree
Solid tumour 0.000271442 1 0 BeFree

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