IDH1 (isocitrate dehydrogenase (NADP(+)) 1)

symbol:
IDH1
locus group:
protein-coding gene
location:
2q34
gene_family:
alias symbol:
None
alias name:
None
entrez id:
3417
ensembl gene id:
ENSG00000138413
ucsc gene id:
uc002vcu.5
refseq accession:
NM_005896
hgnc_id:
HGNC:5382
approved reserved:
2001-06-22
2q34
基因染色体位置图

IDH1(异柠檬酸脱氢酶1)是一种重要的代谢酶,属于异柠檬酸脱氢酶(IDH)基因家族,该家族还包括IDH2和IDH3。IDH家族成员在细胞代谢中发挥关键作用,催化异柠檬酸氧化脱羧生成α-酮戊二酸(α-KG),这是三羧酸循环(TCA循环)和细胞能量代谢的核心反应。IDH1主要位于细胞质和过氧化物酶体中,而IDH2和IDH3则位于线粒体内。IDH1的突变与多种疾病密切相关,尤其是癌症。最常见的突变形式是IDH1 R132位点的点突变(如R132H),这种突变导致酶功能异常,使其将α-KG转化为致癌代谢物D-2-羟基戊二酸(D-2HG)。D-2HG积累会干扰表观遗传调控,抑制α-KG依赖性双加氧酶活性,进而影响细胞分化并促进肿瘤发生。IDH1突变在胶质瘤、急性髓系白血病(AML)和软骨肉瘤等肿瘤中高频出现,已成为重要的诊断标志物和治疗靶点。IDH1过表达可能增强细胞抗氧化能力,因为其参与NADPH生成,但突变型IDH1的过表达会促进肿瘤进展。相反,IDH1表达降低可能导致代谢紊乱,影响脂质合成和氧化还原平衡。针对突变IDH1的抑制剂(如艾伏尼布)已获批用于治疗IDH1突变型AML,通过减少D-2HG产生发挥抗肿瘤作用。IDH1的正常功能对维持细胞代谢稳态至关重要,而其突变则通过代谢重编程驱动肿瘤发生,这一特点使其成为癌症研究和精准治疗的重要分子。

Isocitrate dehydrogenases catalyze the oxidative decarboxylation of isocitrate to 2-oxoglutarate. These enzymes belong to two distinct subclasses, one of which utilizes NAD(+) as the electron acceptor and the other NADP(+). Five isocitrate dehydrogenases have been reported: three NAD(+)-dependent isocitrate dehydrogenases, which localize to the mitochondrial matrix, and two NADP(+)-dependent isocitrate dehydrogenases, one of which is mitochondrial and the other predominantly cytosolic. Each NADP(+)-dependent isozyme is a homodimer. The protein encoded by this gene is the NADP(+)-dependent isocitrate dehydrogenase found in the cytoplasm and peroxisomes. It contains the PTS-1 peroxisomal targeting signal sequence. The presence of this enzyme in peroxisomes suggests roles in the regeneration of NADPH for intraperoxisomal reductions, such as the conversion of 2, 4-dienoyl-CoAs to 3-enoyl-CoAs, as well as in peroxisomal reactions that consume 2-oxoglutarate, namely the alpha-hydroxylation of phytanic acid. The cytoplasmic enzyme serves a significant role in cytoplasmic NADPH production. Alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Sep 2013]

异柠檬酸脱氢酶催化异柠檬酸的氧化脱羧到2-酮戊二酸。这些酶属于两个不同的亚类,其中一个利用NAD(+)用作电子受体和其它NADP(+)。五异柠檬酸脱氢酶已经报道:三位NAD(+) - 依赖的异柠檬酸脱氢酶,其定位于线粒体基质,和两个NADP(+) - 依赖的异柠檬酸脱氢酶,其中之一就是线粒体和其他主要胞质。每个NADP(+) - 依赖性同功酶是同型二聚体。蛋白质ENCOD由该基因编在NADP(+) - 依赖的异柠檬酸在细胞质和过氧化物酶体中发现的脱氢酶。它包含的PTS-1过氧化物酶体靶向信号序列。在过氧化物酶这种酶的存在下,在消耗2-酮戊二酸的过氧化物酶反应表明角色的NADPH为intraperoxisomal减少,如2的转换,4-二烯酰基辅酶A到3-烯酰基辅酶A中,再生以及,即植烷酸的α羟基化。细胞质酶供应细胞质NADPH生产显著的作用。已发现此基因编码相同蛋白质可变剪接转录物变体。 [由RefSeq的,2013年9月提供]

IDH1基因的碱基序列:[NCBI]
Loading Gene Browser...
IDH1基因的碱基突变:           仅显示部分snp
rs1023751       rs1446325       rs10194538       rs10207062       rs12478635       rs12621845       rs12694100       rs28384385       rs55919809       rs73070962       rs73983721       rs73983722       rs74700116       rs75991859       rs76307533       rs76395405       rs76421084      

IDH1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TCTATTGAGACAATTGAGGCTG
58
TCAGAACGTTGCACATTGG
59
TGTGAGTCTGAGCTTGTGAG
60
TGAATGTAGTTTATCGCCTGC
59
TTCAGAGAAGCCATTATCTGC
58
AGTTGCTCTGTATTGATCCC
57
GGATCTACATAGCTATGATTTAGGC
59
TTATAGCTTCTGCAGCATCCT
59
TAACTTTGAAGAAGGTGGTGG
58
AGCCATTTGGAAGGAACTG
58
TAACTTTGAAGAAGGTGGTGG
58
AGCCATTTGGAAGGAACTG
58
TGCAAGGAGATGAAATGACAC
59
GCCTAAATCATAGCTATGTAGATCC
59
TAACTTTGAAGAAGGTGGTGG
58
AGCCATTTGGAAGGAACTG
58
GGATCTACATAGCTATGATTTAGGC
59
TTATAGCTTCTGCAGCATCCT
59
TGTGAGTCTGAGCTTGTGAG
60
TGAATGTAGTTTATCGCCTGC
59
      尚未收录相关数据

IDH1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

IDH1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0004450
C9J4N6 (UniProtKB)
IEA
GO:0006102
C9J4N6 (UniProtKB)
IEA
GO:0055114
C9J4N6 (UniProtKB)
IEA
GO:0004450
C9JJE5 (UniProtKB)
IEA
GO:0006102
C9JJE5 (UniProtKB)
IEA
GO:0055114
C9JJE5 (UniProtKB)
IEA
GO:0004450
C9JLU6 (UniProtKB)
IEA
GO:0006102
C9JLU6 (UniProtKB)
IEA
GO:0055114
C9JLU6 (UniProtKB)
IEA
GO:0000287
O75874 (UniProtKB)
IDA
GO:0004450
O75874 (UniProtKB)
IDA
GO:0004450
O75874 (UniProtKB)
EXP
GO:0004450
O75874 (UniProtKB)
EXP
GO:0004450
O75874 (UniProtKB)
IDA
GO:0004450
O75874 (UniProtKB)
IDA
GO:0005102
O75874 (UniProtKB)
IPI
GO:0005737
O75874 (UniProtKB)
IDA
GO:0005739
O75874 (UniProtKB)
IEA
GO:0005777
O75874 (UniProtKB)
IDA
GO:0005782
O75874 (UniProtKB)
TAS
GO:0005829
O75874 (UniProtKB)
IDA
GO:0005829
O75874 (UniProtKB)
TAS
GO:0005829
O75874 (UniProtKB)
TAS
GO:0006097
O75874 (UniProtKB)
IEA
GO:0006099
O75874 (UniProtKB)
IEA
GO:0006102
O75874 (UniProtKB)
IDA
GO:0006102
O75874 (UniProtKB)
IDA
GO:0006102
O75874 (UniProtKB)
IDA
GO:0006103
O75874 (UniProtKB)
IDA
GO:0006103
O75874 (UniProtKB)
TAS
GO:0006740
O75874 (UniProtKB)
TAS
GO:0006749
O75874 (UniProtKB)
IEA
GO:0006979
O75874 (UniProtKB)
IEA
GO:0008585
O75874 (UniProtKB)
IEA
GO:0042803
O75874 (UniProtKB)
IPI
GO:0048545
O75874 (UniProtKB)
IEA
GO:0050661
O75874 (UniProtKB)
IEA
GO:0051287
O75874 (UniProtKB)
IEA
GO:0051990
O75874 (UniProtKB)
EXP
GO:0060696
O75874 (UniProtKB)
IEA
GO:0070062
O75874 (UniProtKB)
IDA
GO:0070062
O75874 (UniProtKB)
IDA
GO:0070062
O75874 (UniProtKB)
IDA
GO:0071071
O75874 (UniProtKB)
IEA

可能调控 IDH1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Enchondromatosis 0.240814326 4 0 BeFree_CTD_human_ORPHANET
Glioma 0.221550393 298 5 BeFree_CTD_human_GAD_LHGDN
oligodendroglioma 0.138783028 37 3 BeFree_CTD_human_GAD_LHGDN
Cholangiocarcinoma 0.122171535 8 0 BeFree_CTD_human
Precursor Cell Lymphoblastic Leukemia Lymphoma 0.121085767 5 2 BeFree_CTD_human
Maffucci Syndrome 0.121085767 4 1 BeFree_ORPHANET
Liver carcinoma 0.120542884 3 0 BeFree_CTD_human
gliosarcoma 0.120542884 2 0 BeFree_ORPHANET
Hemangioma 0.120542884 2 3 BeFree_CTD_human
Chondroma 0.120542884 3 0 BeFree_CTD_human

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