HLA-DRB5 (major histocompatibility complex, class II, DR beta 5)

symbol:
HLA-DRB5
locus group:
protein-coding gene
location:
6p21.32
gene_family:
Histocompatibility complex|C1-set domain containing
alias symbol:
None
alias name:
None
entrez id:
3127
ensembl gene id:
ENSG00000198502
ucsc gene id:
uc003obj.4
refseq accession:
NM_002125
hgnc_id:
HGNC:4953
approved reserved:
1990-10-16
6p21.32
基因染色体位置图

HLA-DRB5是人类白细胞抗原(HLA)基因家族中的一员,属于HLA II类基因。HLA基因家族编码主要组织相容性复合体(MHC)蛋白,在免疫系统中起关键作用,负责抗原呈递以激活T细胞。HLA-DRB5基因位于6号染色体上,与HLA-DRB1基因紧密连锁。HLA-DRB5编码的蛋白质是HLA-DRβ链的一部分,与HLA-DRα链结合形成HLA-DR异二聚体,参与外源性抗原的呈递。HLA-DRB5的表达具有多态性,其表达水平在不同个体间存在差异。HLA-DRB5的突变可能影响其抗原结合能力或与T细胞的相互作用,导致免疫应答异常。HLA-DRB5与多种自身免疫性疾病相关,如多发性硬化症、类风湿性关节炎和系统性红斑狼疮。研究表明,某些HLA-DRB5等位基因可能增加或降低这些疾病的易感性。HLA-DRB5过表达可能导致过度免疫激活,增加自身免疫疾病风险;而表达降低可能削弱对外来病原体的免疫应答。HLA-DRB5的表达受多种因素调控,包括细胞因子和转录因子。HLA II类基因家族的共性包括编码细胞表面糖蛋白、参与抗原呈递、具有高度多态性以及在免疫应答中起核心作用。HLA-DRB5的研究有助于理解自身免疫疾病的发病机制和开发新的免疫治疗策略。

HLA-DRB5 belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DRA) and a beta (DRB) chain, both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DR molecule the beta chain contains all the polymorphisms specifying the peptide binding specificities. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. DRB1 is expressed at a level five times higher than its paralogues DRB3, DRB4 and DRB5. The presence of DRB5 is linked with allelic variants of DRB1, otherwise it is omitted. There are 4 related pseudogenes: DRB2, DRB6, DRB7, DRB8 and DRB9. [provided by RefSeq, Jul 2008]

HLA-DRB5属于HLA II类β链旁系同源基??因。此Ⅱ类分子是选自由α(DRA)和β(DRB)链,无论在膜锚定的异源二聚体。它起着通过呈现由胞外蛋白衍生的肽在免疫系统中发挥中心作用。 (:B淋巴细胞,树突细胞,巨噬细胞,APC)II类分子在抗原呈递细胞中表达。的β链为约26-28 kDa和其基因含有6个外显子。外显子1编码前导肽,外显子2和3编码的两个细胞外结构域,外显子4编码的跨膜结构域和外显子5编码胞质尾区。在DR分子的β链包含了所有的多态性指定肽结合特异性。打字这些多态性是经常的骨髓和肾移植完成。 DRB1是在表达水平低于其旁系同源DRB3,DRB4和DRB5的5倍。 DRB5的存在与DRB1的等位基因变体相连,否则,它被删去。有4个相关的假:DRB2,DRB6,DRB7,DRB8和DRB9。 [由RefSeq的,2008年7月提供]

HLA-DRB5基因的碱基序列:[NCBI]
Loading Gene Browser...
HLA-DRB5基因的碱基突变:           仅显示部分snp
rs696318       rs701884       rs707956       rs1059350       rs1059576       rs1059580       rs1059598       rs1059633       rs1059643       rs1064587       rs1064594       rs1064595       rs1064677       rs1071747       rs1071748       rs1071751       rs1071759      

HLA-DRB5基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CGAAGTGGAGAGGTTTACAC
58
AGACTGTGCTCTCCATTCC
59
TGGAGAGGTTTACACCTGC
59
GATTCAGACTGTGCTCTCCA
60
GTGGAGAGGTTTACACCTG
58
ATTCAGACTGTGCTCTCCA
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
CIITA
HLA-DRB5
Unknown
RFX5
HLA-DRB5
Unknown
RFXANK
HLA-DRB5
Unknown
RFXAP
HLA-DRB5
Unknown

HLA-DRB5基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

HLA-DRB5基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000139
Q30154 (UniProtKB)
TAS
GO:0000139
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
IDA
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005765
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0005886
Q30154 (UniProtKB)
TAS
GO:0012507
Q30154 (UniProtKB)
TAS
GO:0012507
Q30154 (UniProtKB)
TAS
GO:0019886
Q30154 (UniProtKB)
TAS
GO:0030658
Q30154 (UniProtKB)
TAS
GO:0030658
Q30154 (UniProtKB)
TAS
GO:0030666
Q30154 (UniProtKB)
TAS
GO:0030666
Q30154 (UniProtKB)
TAS
GO:0030669
Q30154 (UniProtKB)
TAS
GO:0030669
Q30154 (UniProtKB)
TAS
GO:0031295
Q30154 (UniProtKB)
TAS
GO:0031902
Q30154 (UniProtKB)
IDA
GO:0032588
Q30154 (UniProtKB)
TAS
GO:0032588
Q30154 (UniProtKB)
TAS
GO:0032588
Q30154 (UniProtKB)
TAS
GO:0032588
Q30154 (UniProtKB)
TAS
GO:0032588
Q30154 (UniProtKB)
TAS
GO:0042605
Q30154 (UniProtKB)
ISS
GO:0042613
Q30154 (UniProtKB)
ISS
GO:0050852
Q30154 (UniProtKB)
TAS
GO:0060333
Q30154 (UniProtKB)
TAS
GO:0070062
Q30154 (UniProtKB)
IDA
GO:0070062
Q30154 (UniProtKB)
IDA
GO:0071556
Q30154 (UniProtKB)
TAS
GO:0071556
Q30154 (UniProtKB)
TAS
GO:0071556
Q30154 (UniProtKB)
TAS
GO:0071556
Q30154 (UniProtKB)
TAS

可能调控 HLA-DRB5基因的相关microRNA:     

Reactome

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Hypersensitivity 0.12 1 0 CTD_human
Multiple Sclerosis 0.023169705 27 1 BeFree_GAD_LHGDN
Lupus Erythematosus, Systemic 0.014006695 12 0 BeFree_GAD
Diabetes Mellitus, Insulin-Dependent 0.01198705 21 0 BeFree_GAD
HIV Infections 0.00764398 4 0 BeFree_GAD
Gestational Diabetes 0.007372538 4 0 BeFree_GAD
Sarcoidosis 0.007372538 4 0 BeFree_GAD
Rheumatoid Arthritis 0.006710102 17 0 BeFree_GAD
Systemic Scleroderma 0.006091273 7 0 BeFree_GAD
Tuberculosis 0.005005506 3 0 BeFree_GAD

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