ABCB4 (ATP binding cassette subfamily B member 4)

symbol:
ABCB4
locus group:
protein-coding gene
location:
7q21.12
gene_family:
ATP-binding cassette, sub-family B (MDR/TAP)
alias symbol:
MDR2|PFIC-3|GBD1
alias name:
None
entrez id:
5244
ensembl gene id:
ENSG00000005471
ucsc gene id:
uc003uix.1
refseq accession:
NM_000443
hgnc_id:
HGNC:45
approved reserved:
1988-05-11
7q21.12
基因染色体位置图

ABCB4基因属于ATP结合盒(ABC)转运蛋白超家族,具体属于B亚家族(ABCB),该家族成员通常作为跨膜转运蛋白参与多种物质的主动运输,依赖ATP水解提供能量。ABCB4基因编码的蛋白也被称为多药耐药蛋白3(MDR3),主要在肝脏胆管膜上表达,负责将磷脂(尤其是磷脂酰胆碱)从肝细胞转运至胆汁中,这对胆汁的形成和胆固醇的溶解至关重要。ABCB4的功能异常会导致胆汁中磷脂含量不足,使胆固醇结晶析出,引发胆汁淤积性疾病如进行性家族性肝内胆汁淤积症3型(PFIC3)和妊娠期肝内胆汁淤积症(ICP)。突变可能造成蛋白折叠错误、膜定位障碍或转运活性丧失,表现为黄疸、瘙痒及肝纤维化等症状。若ABCB4过表达可能增强胆汁磷脂分泌,理论上可改善胆固醇结石的溶解,但过度活跃可能扰乱胆汁成分平衡;而表达降低会直接导致胆汁磷脂缺乏,促使胆结石形成并损伤胆管上皮。该基因与ABCB1(MDR1/P-gp)等家族成员共享典型的ABC转运蛋白结构域,包括核苷酸结合域(NBD)和跨膜域(TMD),但底物特异性不同——ABCB1主要外排药物分子,而ABCB4专一性转运磷脂。研究还发现ABCB4单核苷酸多态性(SNPs)可能影响药物代谢,例如某些患者对化疗药物敏感性的差异。此外,ABCB4表达受核受体FXR和LXR调控,与脂代谢网络相关联,其表达异常可能间接影响其他脂相关基因(如CYP7A1)的功能。

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance as well as antigen presentation. This gene encodes a full transporter and member of the p-glycoprotein family of membrane proteins with phosphatidylcholine as its substrate. The function of this protein has not yet been determined; however, it may involve transport of phospholipids from liver hepatocytes into bile. Alternative splicing of this gene results in several products of undetermined function. [provided by RefSeq, Jul 2008]

由该基因编码的膜相关蛋白是ATP结合盒(ABC)转运蛋白的超家族中的一员。 ABC蛋白质跨越预算外内和细胞膜输送各种分子。 ABC基因被分为七个不同亚科(ABC1,MDR / TAP,MRP,ALD,OABP,GCN20,白色)。这种蛋白是对MDR / TAP亚科的成员。耐多药/ TAP亚家族成员都参与了多药耐药以及抗原提呈。该基因编码的膜蛋白的P-糖蛋白家族的一个完整的转运和构件用磷脂作为其底物。这种蛋白质的功能尚未确定;然而,它可能涉及从肝细胞磷脂的转运到胆汁。该基因的可变剪接导致未确定功能的几款产品。 [由RefSeq的,2008年7月提供]

ABCB4基因的碱基序列:[NCBI]
Loading Gene Browser...
ABCB4基因的碱基突变:           仅显示部分snp
rs31653       rs31654       rs31655       rs31656       rs31657       rs31658       rs31659       rs31660       rs31661       rs31662       rs31663       rs31664       rs31666       rs31667       rs31668       rs31669       rs31670      

ABCB4基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AAAGGTTGTCCAAGAAGCC
58
TGAGCAATCACAATGCAGG
59
GTGAAGAAAGGCCAGACAC
59
AAGTCCACAAACACTGTCC
58
GTTTCGATACTCCGATTGGC
59
CTATGGCCATGATGGTACC
58
AAACCGATGGACTTGAAGC
59
GACAAAGTAGGGCCATTCTG
59
TGTATGGACCTTACAGGGTG
59
TAGTCTGGAGCAAATGAACTG
58
AAGCTACATCAGCTCTGGA
58
TTCTCTGGCTTTGTCCAGG
60
AAGCAAGAGGCTGAGATGG
60
CTGCCAATCGGAGTATCGA
59
ACAGTTGTGTCTTTGACCC
58
CACAGAATTCCTGTAAGGTCC
59
AAGCTACATCAGCTCTGGA
58
TTCTCTGGCTTTGTCCAGG
60
ATACTGCAGGAAACTTCTCCT
59
TTTGCCTGGATTTAGCAGC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
NR1H4
ABCB4
Activation

ABCB4基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

ABCB4基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0002481
P21439 (UniProtKB)
IBA
GO:0002485
P21439 (UniProtKB)
IBA
GO:0002489
P21439 (UniProtKB)
IBA
GO:0002591
P21439 (UniProtKB)
IBA
GO:0005515
P21439 (UniProtKB)
IPI
GO:0005524
P21439 (UniProtKB)
IEA
GO:0005548
P21439 (UniProtKB)
TAS
GO:0005737
P21439 (UniProtKB)
IDA
GO:0005886
P21439 (UniProtKB)
IDA
GO:0005886
P21439 (UniProtKB)
IDA
GO:0005886
P21439 (UniProtKB)
TAS
GO:0005886
P21439 (UniProtKB)
TAS
GO:0005887
P21439 (UniProtKB)
TAS
GO:0006629
P21439 (UniProtKB)
TAS
GO:0006810
P21439 (UniProtKB)
TAS
GO:0006855
P21439 (UniProtKB)
IEA
GO:0008525
P21439 (UniProtKB)
IMP
GO:0008525
P21439 (UniProtKB)
IDA
GO:0008559
P21439 (UniProtKB)
IEA
GO:0016020
P21439 (UniProtKB)
TAS
GO:0016324
P21439 (UniProtKB)
IDA
GO:0016324
P21439 (UniProtKB)
IDA
GO:0030136
P21439 (UniProtKB)
IEA
GO:0032376
P21439 (UniProtKB)
IDA
GO:0032376
P21439 (UniProtKB)
IMP
GO:0032782
P21439 (UniProtKB)
ISS
GO:0042493
P21439 (UniProtKB)
TAS
GO:0042626
P21439 (UniProtKB)
IDA
GO:0042626
P21439 (UniProtKB)
IMP
GO:0042908
P21439 (UniProtKB)
IEA
GO:0045121
P21439 (UniProtKB)
IEA
GO:0045332
P21439 (UniProtKB)
IMP
GO:0046581
P21439 (UniProtKB)
IEA
GO:0055085
P21439 (UniProtKB)
TAS
GO:0055088
P21439 (UniProtKB)
IDA
GO:0061092
P21439 (UniProtKB)
IDA
GO:0070062
P21439 (UniProtKB)
IDA
GO:0090554
P21439 (UniProtKB)
IDA
GO:0090554
P21439 (UniProtKB)
IMP
GO:1901557
P21439 (UniProtKB)
ISS
GO:1903413
P21439 (UniProtKB)
IDA
GO:2001140
P21439 (UniProtKB)
IMP
GO:2001140
P21439 (UniProtKB)
IDA

可能调控 ABCB4基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Cholestasis, progressive familial intrahepatic 3 0.560542884 9 8 BeFree_CLINVAR_CTD_human_MGD_ORPHANET_UNIPROT
Low phospholipid-associated cholelithiasis 0.442442977 15 0 BeFree_CTD_human_MGD_ORPHANET_UNIPROT
Cholestasis of pregnancy 0.246786047 25 0 BeFree_CTD_human_ORPHANET
CHOLESTASIS, INTRAHEPATIC, OF PREGNANCY 3 0.24 3 7 CLINVAR_UNIPROT
Liver carcinoma 0.201628651 7 0 BeFree_CTD_human_MGD
Progressive intrahepatic cholestasis (disorder) 0.127871814 30 0 BeFree_CTD_human
Biliary cirrhosis 0.126448592 7 0 BeFree_CTD_human_GAD_LHGDN
Cholangitis, Sclerosing 0.123181358 4 0 BeFree_CTD_human_GAD
Inflammation 0.122367032 2 0 CTD_human_GAD
Liver Cirrhosis 0.121085767 6 0 BeFree_CTD_human

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