ABCA5 (ATP binding cassette subfamily A member 5)

symbol:
ABCA5
locus group:
protein-coding gene
location:
17q24.3
gene_family:
ATP-binding cassette, sub-family A (ABC1)
alias symbol:
EST90625
alias name:
None
entrez id:
23461
ensembl gene id:
ENSG00000154265
ucsc gene id:
uc002jig.3
refseq accession:
NM_018672
hgnc_id:
HGNC:35
approved reserved:
1999-10-26
17q24.3
基因染色体位置图

ABCA5属于ATP结合盒转运蛋白(ABC转运蛋白)超家族中的ABCA亚家族,该家族成员以依赖ATP的能量跨膜转运多种分子(如脂质、胆固醇和代谢产物)为主要功能。ABCA5在溶酶体和内体中高表达,参与细胞内脂质转运和代谢调控,尤其在胆固醇稳态中起关键作用。其表达产物是一种跨膜蛋白,通过水解ATP提供能量,将底物(如磷脂或胆固醇)从细胞质侧转运至细胞器或细胞外空间。研究表明,ABCA5基因突变可能导致溶酶体功能障碍,与尼曼-匹克病C型(NPC)等溶酶体贮积症相关,表现为胆固醇在溶酶体中异常积累,进而引发神经退行性变和肝脾肿大。过表达ABCA5可增强胆固醇外排,改善NPC细胞模型中的脂质堆积,而敲低该基因会加剧溶酶体胆固醇沉积并影响自噬过程。此外,ABCA5在多种癌症(如前列腺癌和肝癌)中表达异常,其过表达可能通过调节胆固醇代谢促进肿瘤细胞存活,而表达降低则与化疗耐药性相关。ABCA亚家族的共性包括含有两个核苷酸结合结构域(NBD)和两个跨膜结构域(TMD),形成"正向转运"机制。该家族其他成员如ABCA1(介导胆固醇逆向转运)和ABCA4(参与视黄醛代谢)均与人类疾病密切相关,凸显ABCA蛋白在代谢调控中的广泛重要性。目前针对ABCA5的研究仍处于探索阶段,其精确分子机制和潜在治疗价值有待进一步阐明。

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intracellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, and White). This encoded protein is a member of the ABC1 subfamily. Members of the ABC1 subfamily comprise the only major ABC subfamily found exclusively in multicellular eukaryotes. This gene is clustered among 4 other ABC1 family members on 17q24, but neither the substrate nor the function of this gene is known. Alternative splicing of this gene results in several transcript variants; however, not all variants have been fully described. [provided by RefSeq, Jul 2008]

由该基因编码的膜相关蛋白是ATP结合盒(ABC)转运蛋白的超家族中的一员。 ABC蛋白质跨越细胞内外膜运输各种分子。 ABC基因被分为七个不同亚科(ABC1,MDR / TAP,MRP,ALD,OABP,GCN20和白色)。这个编码的蛋白是ABC1亚科的成员。该ABC1亚科的成员包括只在多真核生物中发现的唯一的主要ABC亚科。该基因中4其他ABC1家族成员群集上17q24,但无论是基片还是这个基因的功能是已知的。在几个转录变异体本基因的结果的选择性剪接;然而,并非所有的变体已被充分地描述。 [由RefSeq的,2008年7月提供]

ABCA5基因的碱基序列:[NCBI]
Loading Gene Browser...
ABCA5基因的碱基突变:           仅显示部分snp
rs1476749       rs1990248       rs3214269       rs7212957       rs7213764       rs8070591       rs12942867       rs12944139       rs12951692       rs74497214       rs74711851       rs79372941       rs79991626       rs115926511       rs116936585       rs117879652       rs138660507      

ABCA5基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TGAACGTCTGGACTCTAGG
58
AGAGGTTTCATTCCAGCTG
57
CTGCCATTATACAGTTGAAGAC
57
GCAGTTTCTCCCATAATAACAG
57
CAAGCAACATTGGAACAGG
57
CCACAACTATTATCTTCCTCCTC
58
CGCCTTCAAAGAGAAATTCAG
57
AGGGACTGAACATCTTCCT
57
GAATGCTGAAATGTGTTGGT
57
TTGTCTATGTACATGCTCAGG
57
GGACCTGTGATAGGTTTATTCAG
58
GTAGAAGTGTTCTGGTCTGTC
58
GAAGATGAAGATGTCAAAGCTG
57
TAATGGATGGTTTCTCCTCAC
57
TCTACTGATCATCTACCTGATGTC
59
AAAGTTGCTCGGCTTAGAG
57
GGACCTGTGATAGGTTTATTCAG
58
TAGAAGTGTTCTGGTCTGTCTC
59
GGAATGCTGAAATGTGTTGG
58
GTCTATGTACATGCTCAGGC
58
      尚未收录相关数据

ABCA5基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

ABCA5基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005215
A0A075B778 (UniProtKB)
IEA
GO:0006810
A0A075B778 (UniProtKB)
IEA
GO:0016021
A0A075B778 (UniProtKB)
IEA
GO:0005215
K7EJW6 (UniProtKB)
IEA
GO:0005524
K7EJW6 (UniProtKB)
IEA
GO:0006810
K7EJW6 (UniProtKB)
IEA
GO:0016021
K7EJW6 (UniProtKB)
IEA
GO:0016887
K7EJW6 (UniProtKB)
IEA
GO:0005215
K7EKS9 (UniProtKB)
IEA
GO:0006810
K7EKS9 (UniProtKB)
IEA
GO:0016021
K7EKS9 (UniProtKB)
IEA
GO:0005215
K7EMV2 (UniProtKB)
IEA
GO:0006810
K7EMV2 (UniProtKB)
IEA
GO:0016021
K7EMV2 (UniProtKB)
IEA
GO:0005215
K7ENF9 (UniProtKB)
IEA
GO:0006810
K7ENF9 (UniProtKB)
IEA
GO:0016021
K7ENF9 (UniProtKB)
IEA
GO:0005215
K7EPM3 (UniProtKB)
IEA
GO:0005524
K7EPM3 (UniProtKB)
IEA
GO:0006810
K7EPM3 (UniProtKB)
IEA
GO:0016021
K7EPM3 (UniProtKB)
IEA
GO:0016887
K7EPM3 (UniProtKB)
IEA
GO:0005215
K7EQ50 (UniProtKB)
IEA
GO:0006810
K7EQ50 (UniProtKB)
IEA
GO:0016021
K7EQ50 (UniProtKB)
IEA
GO:0000139
Q8WWZ7 (UniProtKB)
IEA
GO:0005524
Q8WWZ7 (UniProtKB)
IEA
GO:0005764
Q8WWZ7 (UniProtKB)
ISS
GO:0005765
Q8WWZ7 (UniProtKB)
IEA
GO:0005770
Q8WWZ7 (UniProtKB)
ISS
GO:0006869
Q8WWZ7 (UniProtKB)
IBA
GO:0010745
Q8WWZ7 (UniProtKB)
ISS
GO:0016021
Q8WWZ7 (UniProtKB)
IEA
GO:0031902
Q8WWZ7 (UniProtKB)
IEA
GO:0033344
Q8WWZ7 (UniProtKB)
ISS
GO:0034375
Q8WWZ7 (UniProtKB)
ISS
GO:0042626
Q8WWZ7 (UniProtKB)
IBA
GO:0043231
Q8WWZ7 (UniProtKB)
IBA
GO:0043691
Q8WWZ7 (UniProtKB)
IC
GO:0055085
Q8WWZ7 (UniProtKB)
IEA

可能调控 ABCA5基因的相关microRNA:     

BioGrid

IntAct

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Hypertrichosis Terminalis, Generalized, with or without Gingival Hyperplasia 0.24 0 1 CLINVAR_ORPHANET
Colorectal Neoplasms 0.12 1 0 CTD_human
Colonic Neoplasms 0.002995792 1 0 BeFree_LHGDN
Prostatic Intraepithelial Neoplasias 0.00272435 1 0 LHGDN
Chronic Obstructive Airway Disease 0.002367032 1 0 GAD
Malignant neoplasm of urinary bladder 0.002367032 1 0 GAD
Malignant neoplasm of lung 0.002367032 1 0 GAD

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