ABAT (4-aminobutyrate aminotransferase)

symbol:
ABAT
locus group:
protein-coding gene
location:
16p13.2
gene_family:
alias symbol:
GABAT|GABA-T
alias name:
4-aminobutyrate transaminase|gamma…
entrez id:
18
ensembl gene id:
ENSG00000183044
ucsc gene id:
uc002czc.5
refseq accession:
NM_020686
hgnc_id:
HGNC:23
approved reserved:
1996-03-13
16p13.2
基因染色体位置图

ABAT(4-氨基丁酸氨基转移酶)是一种重要的代谢酶,主要参与神经递质γ-氨基丁酸(GABA)的降解过程。它通过将GABA转化为琥珀酸半醛(SSA),从而调节GABA能神经传递的强度。GABA是中枢神经系统主要的抑制性神经递质,因此ABAT的功能直接影响神经兴奋性平衡。该酶主要在线粒体中表达,尤其在脑、肝脏和肾脏中活性较高。ABAT属于氨基转移酶家族(transaminase family),这一家族的共性是通过转移氨基基团催化底物转化,通常依赖磷酸吡哆醛(PLP)作为辅因子。ABAT基因突变可能导致酶活性降低,造成GABA代谢障碍,与多种神经系统疾病相关,如癫痫、自闭症谱系障碍和精神发育迟滞。ABAT缺乏症是一种罕见的常染色体隐性遗传病,患者表现为严重发育迟缓、癫痫发作和脑电图异常。过表达ABAT可能加速GABA降解,导致抑制性神经传递减弱,可能引发焦虑、失眠或癫痫发作倾向。相反,ABAT表达降低会使GABA积累,增强神经抑制,可能引起嗜睡、肌张力低下等。此外,ABAT还参与β-丙氨酸和亚牛磺酸代谢,这些代谢物对神经系统和肌肉功能有调节作用。该基因位于16号染色体(16p13.2),其多态性可能与药物反应个体差异有关,特别是对某些抗癫痫药物的敏感性。研究还发现ABAT在某些癌症中表达异常,可能影响肿瘤微环境中的氨基酸代谢。

4-aminobutyrate aminotransferase (ABAT) is responsible for catabolism of gamma-aminobutyric acid (GABA), an important, mostly inhibitory neurotransmitter in the central nervous system, into succinic semialdehyde. The active enzyme is a homodimer of 50-kD subunits complexed to pyridoxal-5-phosphate. The protein sequence is over 95% similar to the pig protein. GABA is estimated to be present in nearly one-third of human synapses. ABAT in liver and brain is controlled by 2 codominant alleles with a frequency in a Caucasian population of 0.56 and 0.44. The ABAT deficiency phenotype includes psychomotor retardation, hypotonia, hyperreflexia, lethargy, refractory seizures, and EEG abnormalities. Multiple alternatively spliced transcript variants encoding the same protein isoform have been found for this gene. [provided by RefSeq, Jul 2008]

4-氨基丁酸氨基转移酶(ABAT)负责γ-氨基丁酸(GABA),在中枢神经系统中重要的是,大部分的抑制性神经递质,成琥珀酸半醛的分解代谢。活性酶是复合的吡哆醛-5-磷酸50kD的亚基的同型二聚体。蛋白质序列是类似于猪蛋白在95%以上。 GABA估计为存在于人类突触近三分之一。 ABAT在肝和脑是由2显性等位基因与0.56和0.44高加索人群的频率进行控制。阿瓦特缺陷的表型,包括精神运动迟缓,肌张力低下,反射亢进,嗜睡,癫痫难治和脑电图异常。已发现了该基因编码的蛋白质相同的多个亚型选择性剪接转录变异体。 [由RefSeq的,2008年7月提供]

ABAT基因的碱基序列:[NCBI]
Loading Gene Browser...
ABAT基因的碱基突变:           仅显示部分snp
rs8275       rs9456       rs10261       rs730750       rs737694       rs737695       rs737696       rs747329       rs747330       rs753070       rs753071       rs933480       rs933481       rs933482       rs1006636       rs1060784       rs1061842      

ABAT基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TTTAAGCAAGCGAGCTGAG
59
AACCTTTCAGGATTCCCAC
57
AGAATGGCATACAGAAGGCA
60
AATGTGTCTGGATCCAGGC
60
TCAGAGCAAGGAAAGAGGG
59
CTAAGCAACCCATGGTCCT
59
TGCCAGAAACAAAGGTGTG
59
GGTGATCCCTGAAGACCAG
60
TGCCAGAAACAAAGGTGTG
59
GGTGATCCCTGAAGACCAG
60
TGCCAGAAACAAAGGTGTG
59
GGTGATCCCTGAAGACCAG
60
CATTAGTCAAGCTGCAGCC
59
TCATTAACTCCTGAGATCTAGGC
59
ATGAAGACGGAAGTCCCAG
59
GGTGGCTGTAACCTATGGG
60
CTGGATCCAGACACATTAGTC
58
GCTGTTTCATTAACTCCTGAG
57
GCCAGAAACAAAGCTCTCC
59
ACACCACACCTGAAAGAGG
60
      尚未收录相关数据

ABAT基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

ABAT基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0008483
H3BMJ9 (UniProtKB)
IEA
GO:0030170
H3BMJ9 (UniProtKB)
IEA
GO:0003867
H3BNQ7 (UniProtKB)
IEA
GO:0009448
H3BNQ7 (UniProtKB)
IEA
GO:0030170
H3BNQ7 (UniProtKB)
IEA
GO:0008483
H3BPW8 (UniProtKB)
IEA
GO:0030170
H3BPW8 (UniProtKB)
IEA
GO:0008483
H3BRJ1 (UniProtKB)
IEA
GO:0030170
H3BRJ1 (UniProtKB)
IEA
GO:0003867
H3BRN4 (UniProtKB)
IEA
GO:0009448
H3BRN4 (UniProtKB)
IEA
GO:0030170
H3BRN4 (UniProtKB)
IEA
GO:0008483
H3BRT1 (UniProtKB)
IEA
GO:0030170
H3BRT1 (UniProtKB)
IEA
GO:0001666
P80404 (UniProtKB)
IEA
GO:0003867
P80404 (UniProtKB)
TAS
GO:0005739
P80404 (UniProtKB)
ISS
GO:0005739
P80404 (UniProtKB)
IBA
GO:0005739
P80404 (UniProtKB)
IDA
GO:0005759
P80404 (UniProtKB)
TAS
GO:0007568
P80404 (UniProtKB)
IEA
GO:0007620
P80404 (UniProtKB)
IEA
GO:0007626
P80404 (UniProtKB)
IEA
GO:0009449
P80404 (UniProtKB)
IEA
GO:0009450
P80404 (UniProtKB)
IBA
GO:0009450
P80404 (UniProtKB)
NAS
GO:0010039
P80404 (UniProtKB)
IEA
GO:0014053
P80404 (UniProtKB)
IEA
GO:0021549
P80404 (UniProtKB)
IEA
GO:0030170
P80404 (UniProtKB)
IDA
GO:0031652
P80404 (UniProtKB)
IEA
GO:0032024
P80404 (UniProtKB)
IEA
GO:0032144
P80404 (UniProtKB)
IDA
GO:0032145
P80404 (UniProtKB)
ISS
GO:0033602
P80404 (UniProtKB)
IEA
GO:0035094
P80404 (UniProtKB)
IEA
GO:0035640
P80404 (UniProtKB)
IEA
GO:0042135
P80404 (UniProtKB)
NAS
GO:0042493
P80404 (UniProtKB)
IEA
GO:0042803
P80404 (UniProtKB)
IPI
GO:0043005
P80404 (UniProtKB)
IEA
GO:0045471
P80404 (UniProtKB)
IEA
GO:0045776
P80404 (UniProtKB)
IEA
GO:0045964
P80404 (UniProtKB)
IEA
GO:0046872
P80404 (UniProtKB)
IEA
GO:0047298
P80404 (UniProtKB)
IEA
GO:0048148
P80404 (UniProtKB)
ISS
GO:0051536
P80404 (UniProtKB)
IEA
GO:0070062
P80404 (UniProtKB)
IDA
GO:0070474
P80404 (UniProtKB)
IEA
GO:0090331
P80404 (UniProtKB)
IEA
GO:0097151
P80404 (UniProtKB)
IEA
GO:1902722
P80404 (UniProtKB)
IEA
GO:1904450
P80404 (UniProtKB)
IEA
GO:0003867
P80404 (UniProtKB)
IDA

可能调控 ABAT基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Gamma aminobutyric acid transaminase deficiency 0.48 1 4 CLINVAR_CTD_human_ORPHANET_UNIPROT
Seizures 0.2 4 0 CTD_human_RGD
Autistic Disorder 0.122638474 2 0 BeFree_CTD_human_GAD
Gastroesophageal reflux disease 0.120271442 1 0 BeFree_CTD_human
Lethargy 0.12 1 0 CTD_human
Reflex, Abnormal 0.12 1 0 CTD_human
Psychomotor Disorders 0.12 1 0 CTD_human
Muscle hypotonia 0.12 1 0 CTD_human
Dyskinesia, Drug-Induced 0.082367032 3 0 GAD_RGD
Huntington Disease 0.08 1 0 RGD

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